HORDB

ID: hor004018
Uniprot ID: A0A3R7MI09??284-292)
Protein name: pyrokinin
Gene name: NA
Organism: Penaeus vannamei (Whiteleg shrimp) (Litopenaeus vannamei)
Family: Pyrokinin family
Source: animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Penaeus (genus), Penaeidae (family), Penaeoidea (superfamily), Dendrobranchiata (suborder), Decapoda (order), Eucarida (superorder), Eumalacostraca (subclass), Malacostraca (class), Multicrustacea (superclass), Crustacea (subphylum), Pancrustacea, Mandibulata, Arthropoda (phylum), Panarthropoda, Ecdysozoa, Protostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: NA
GO CC: NA

Sequence: GDFAFSPRL
Length: 9(284-292)
Propeptide: MHALTLTVAALTFLSLAKCSTLTAADTQDALPGYQPRDFSNLAQDDRSLRMFLDFLLNSQQPSPMMGEPLEDSDEGYRRKRSVNTSQEEDVRKEENEETRDKRQTKEEKDEEGETAEEQSGSWWWRPVEERRSYFIPRLGKRDGNDIPALASENDLDNMEYLDDDEVDSGDAEALREEEDPTGEVEKDEDEQDAWAGFGSPLDKRDFAFNPRLGKRQTFTPRLGKRDFAFSPRLGKRDFAFSPRLGKRDFAFNPR
Signal peptide: MHALTLTVAALTFLSLAKC
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor004018_AF2.pdb

hor004018_ESM.pdb

Mass:	115200	Formula:	C47H68N12O13
Absent amino acids:	CEHIKMNQTVWY	Common amino acids:	F
pI:	6.34	Basic residues:	1
Polar residues:	2	Hydrophobic residues:	4
Hydrophobicity:	4.44	Boman Index:	-1341
Half-Life:	30 hour	Half-Life Yeast:	>20 hour
Half-Life E.Coli:	>10 hour	Aliphatic Index	54.44
Instability Index:	4095.56	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

PubMed ID: 19852991
Title: Combining in Silico Transcriptome Mining and Biological Mass Spectrometry for Neuropeptide Discovery in the Pacific White Shrimp Litopenaeus Vannamei